Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | NCTC13639_03824 | Not Available | Negative | 3484789 - 3485973 | 43468.7 |
| amino acid permease | NCTC13639_03825 | Not Available | Negative | 3485981 - 3486211 | 8543.43 |
| putative mfs family transporter protein | NCTC13639_03826 | Not Available | Negative | 3486425 - 3487573 | 41525.4 |
| isochorismatase | NCTC13639_03827 | Not Available | Positive | 3487958 - 3488140 | 6704.17 |
| isochorismatase | NCTC13639_03828 | Not Available | Positive | 3488247 - 3488585 | 12484.9 |
| anaerobic dimethyl sulfoxide reductase chain c | NCTC13639_03829 | Not Available | Negative | 3488695 - 3489558 | 31034.4 |
| anaerobic dimethyl sulfoxide reductase chain b | NCTC13639_03830 | Not Available | Negative | 3489560 - 3490177 | 22638.9 |
| anaerobic dimethyl sulfoxide reductase chain a | NCTC13639_03831 | Not Available | Negative | 3490188 - 3492053 | 69148.1 |
| anaerobic dimethyl sulfoxide reductase chain a | NCTC13639_03832 | Not Available | Negative | 3492025 - 3492576 | 20315.4 |
| seryl-trna synthetase | NCTC13639_03834 | Not Available | Negative | 3492871 - 3494163 | 48502.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

