Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase | NCTC13639_03814 | Not Available | Negative | 3473216 - 3473899 | 24883.9 |
| peptidase | NCTC13639_03815 | Not Available | Negative | 3474071 - 3474832 | 26924.8 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | NCTC13639_03816 | Not Available | Negative | 3474971 - 3476254 | 45992.3 |
| phosphoserine aminotransferase | NCTC13639_03817 | Not Available | Negative | 3476324 - 3477412 | 39721.4 |
| uncharacterised protein | NCTC13639_03818 | Not Available | Negative | 3477515 - 3477685 | 6232.56 |
| protein of uncharacterised function (duf421) | NCTC13639_03819 | Not Available | Negative | 3477625 - 3478317 | 26046.2 |
| fatty acid binding protein | NCTC13639_03820 | Not Available | Positive | 3478454 - 3480214 | 65562.0 |
| formate transporter 1 | NCTC13639_03821 | Not Available | Positive | 3480620 - 3481477 | 30847.4 |
| formate acetyltransferase 1 | NCTC13639_03822 | Not Available | Positive | 3481537 - 3483819 | 85014.4 |
| pyruvate formate lyase-activating enzyme 1 | NCTC13639_03823 | Not Available | Positive | 3484005 - 3484745 | 28280.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

