Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf218 domain | NCTC13639_03804 | Not Available | Positive | 3461564 - 3462328 | 27829.0 |
| uncharacterised protein | NCTC13639_03805 | Not Available | Negative | 3462446 - 3463339 | 34496.7 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | NCTC13639_03806 | Not Available | Negative | 3463504 - 3464250 | 27539.1 |
| trm112p-like protein | NCTC13639_03807 | Not Available | Negative | 3464247 - 3464429 | 6839.35 |
| uncharacterized protein conserved in bacteria | NCTC13639_03808 | Not Available | Negative | 3464481 - 3465713 | 47744.4 |
| tetraacyldisaccharide 4'-kinase | NCTC13639_03809 | Not Available | Negative | 3465755 - 3466732 | 35163.8 |
| lipid transporter atp-binding/permease protein | NCTC13639_03810 | Not Available | Negative | 3466729 - 3468477 | 64434.6 |
| competence-related protein | NCTC13639_03811 | Not Available | Negative | 3468514 - 3470778 | 84588.9 |
| integration host factor subunit beta | NCTC13639_03812 | Not Available | Negative | 3470985 - 3471269 | 10617.8 |
| 30s ribosomal protein s1 | NCTC13639_03813 | Not Available | Negative | 3471429 - 3473102 | 61159.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

