Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yccf | NCTC13639_03764 | Not Available | Positive | 3417944 - 3418390 | 16393.5 |
| inner membrane protein yccs | NCTC13639_03765 | Not Available | Positive | 3418409 - 3420562 | 81334.8 |
| regulator of competence-specific genes | NCTC13639_03766 | Not Available | Negative | 3420540 - 3421154 | 23227.9 |
| sos cell division inhibitor | NCTC13639_03767 | Not Available | Positive | 3421501 - 3421881 | 14210.4 |
| outer membrane protein a | NCTC13639_03768 | Not Available | Positive | 3422239 - 3423285 | 37415.9 |
| macrodomain ter protein | NCTC13639_03769 | Not Available | Negative | 3423377 - 3423829 | 17803.6 |
| atp-dependent protease lon | NCTC13639_03770 | Not Available | Positive | 3424015 - 3425775 | 66030.7 |
| 3-hydroxydecanoyl-(acyl carrier protein) dehydratase | NCTC13639_03771 | Not Available | Positive | 3425736 - 3426362 | 23054.2 |
| ribosome modulation factor | NCTC13639_03772 | Not Available | Negative | 3426470 - 3426637 | 6542.93 |
| lipoprotein | NCTC13639_03773 | Not Available | Negative | 3426894 - 3427457 | 20674.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

