Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide abc transporter substrate-binding protein | NCTC13639_03754 | Not Available | Negative | 3408954 - 3410582 | 60803.9 |
| modulator of ftsh protease ycca | NCTC13639_03755 | Not Available | Positive | 3410854 - 3411513 | 23385.3 |
| sulfur transfer protein tuse | NCTC13639_03756 | Not Available | Positive | 3411602 - 3411931 | 12401.0 |
| acylphosphatase | NCTC13639_03757 | Not Available | Negative | 3411993 - 3412208 | 7776.36 |
| 23s rrna m(2)g2445 methyltransferase | NCTC13639_03758 | Not Available | Positive | 3412318 - 3413493 | 43827.9 |
| heat shock protein hspq | NCTC13639_03759 | Not Available | Positive | 3413551 - 3413868 | 11852.9 |
| coa-binding protein | NCTC13639_03760 | Not Available | Negative | 3413930 - 3414343 | 14736.0 |
| uncharacterized protein conserved in bacteria (duf2057) | NCTC13639_03761 | Not Available | Positive | 3414516 - 3415178 | 24710.6 |
| methylglyoxal synthase | NCTC13639_03762 | Not Available | Positive | 3415272 - 3415730 | 16885.5 |
| dna helicase iv | NCTC13639_03763 | Not Available | Negative | 3415763 - 3417817 | 77728.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

