Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| curli assembly protein csgf | NCTC13639_03693 | Not Available | Positive | 3355344 - 3355757 | 14851.5 |
| curli production assembly/transport component | NCTC13639_03694 | Not Available | Positive | 3355783 - 3356616 | 30530.0 |
| inner membrane protein ycdz | NCTC13639_03695 | Not Available | Negative | 3356663 - 3357145 | 16985.3 |
| chaperone | NCTC13639_03696 | Not Available | Negative | 3357247 - 3357801 | 20658.4 |
| putative hydrolase | NCTC13639_03697 | Not Available | Negative | 3357825 - 3358562 | 26901.1 |
| 2-hydroxyacid dehydrogenase | NCTC13639_03698 | Not Available | Negative | 3358649 - 3359587 | 34702.6 |
| Trna-ser | Not Available | Not Available | Positive | 3359824 - 3359911 | Not Available |
| uncharacterised protein | NCTC13639_03700 | Not Available | Positive | 3360024 - 3360596 | 20223.2 |
| putative chloramphenical resistance permease rard | NCTC13639_03701 | Not Available | Positive | 3361163 - 3362077 | 34190.9 |
| protein of uncharacterised function (duf535) | NCTC13639_03702 | Not Available | Positive | 3363024 - 3363938 | 35557.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

