Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Minor tail protein | NCTC13639_02838 | Not Available | Positive | 2593599 - 2593949 | 12727.1 |
| Minor tail protein l | NCTC13639_02839 | Not Available | Positive | 2593949 - 2594719 | 27815.7 |
| Tail assembly protein k | NCTC13639_02840 | Not Available | Positive | 2594732 - 2595463 | 27842.7 |
| Tail assembly protein | NCTC13639_02841 | Not Available | Positive | 2595451 - 2595843 | 14169.6 |
| Tail assembly protein | NCTC13639_02842 | Not Available | Positive | 2595848 - 2596051 | 6883.25 |
| uncharacterised protein | NCTC13639_02843 | Not Available | Positive | 2596131 - 2596499 | 13803.1 |
| Host specificity protein | NCTC13639_02844 | Not Available | Positive | 2596552 - 2599761 | 116669.0 |
| Hypothetical protein | NCTC13639_02845 | Not Available | Positive | 2599761 - 2600075 | 11009.1 |
| Gp23 | NCTC13639_02846 | Not Available | Positive | 2600076 - 2600750 | 22768.9 |
| Transposase insh, is5d, is5 family | NCTC13639_02847 | Not Available | Negative | 2601108 - 2602088 | 37830.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

