Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC13639_03601 | Not Available | Negative | 3274875 - 3275738 | 33825.2 |
| transcriptional regulator cbl | NCTC13639_03602 | Not Available | Negative | 3276283 - 3277233 | 35604.9 |
| nitrogen assimilation transcriptional regulator | NCTC13639_03603 | Not Available | Negative | 3277335 - 3278252 | 32809.9 |
| Trna-asn | Not Available | Not Available | Positive | 3278579 - 3278654 | Not Available |
| uncharacterised protein | NCTC13639_03605 | Not Available | Positive | 3278700 - 3278927 | 8335.04 |
| rna polymerase sigma factor | NCTC13639_03606 | Not Available | Positive | 3279148 - 3279669 | 19329.4 |
| fec operon regulator fecr | NCTC13639_03607 | Not Available | Positive | 3279666 - 3280619 | 35491.8 |
| iron(iii) dicitrate tonb-dependent receptor | NCTC13639_03608 | Not Available | Positive | 3280706 - 3283030 | 85231.1 |
| iron-dicitrate transporter substrate-binding subunit | NCTC13639_03609 | Not Available | Positive | 3283089 - 3283991 | 32947.8 |
| iron-dicitrate transporter permease subunit | NCTC13639_03610 | Not Available | Positive | 3283988 - 3284986 | 35069.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

