Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | NCTC13639_03571 | Not Available | Positive | 3246579 - 3247790 | 46459.3 |
| uncharacterised protein | NCTC13639_03572 | Not Available | Negative | 3247837 - 3249225 | 53201.9 |
| putative methyltransferase | NCTC13639_03573 | Not Available | Positive | 3249419 - 3250114 | 26516.5 |
| uncharacterised protein | NCTC13639_03574 | Not Available | Positive | 3250111 - 3250320 | 7994.27 |
| putative methyltransferase | NCTC13639_03575 | Not Available | Positive | 3250335 - 3251336 | 38019.2 |
| type iii restriction-modification system stylti enzyme res | NCTC13639_03576 | Not Available | Positive | 3251346 - 3254306 | 111541.0 |
| bacterial shufflon protein, n-terminal constant region | NCTC13639_03577 | Not Available | Negative | 3254433 - 3255938 | 52670.5 |
| bundle-forming pilin | NCTC13639_03578 | Not Available | Negative | 3256158 - 3256727 | 19180.1 |
| conjugal transfer protein trad | NCTC13639_03579 | Not Available | Negative | 3257065 - 3257388 | 12401.3 |
| uncharacterised protein | NCTC13639_03580 | Not Available | Negative | 3257472 - 3257987 | 20297.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

