Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetate-coa oxygenase, paaj subunit | NCTC13639_03561 | Not Available | Negative | 3239514 - 3240014 | 18438.1 |
| phenylacetic acid degradation protein paac | NCTC13639_03562 | Not Available | Negative | 3240027 - 3240782 | 28006.1 |
| phenylacetate-coa oxygenase subunit paab | NCTC13639_03563 | Not Available | Negative | 3240790 - 3241077 | 10936.8 |
| phenylacetic acid degradation protein paaa | NCTC13639_03564 | Not Available | Negative | 3241089 - 3242018 | 35115.7 |
| n-succinylglutamate 5-semialdehyde dehydrogenase | NCTC13639_03565 | Not Available | Positive | 3242304 - 3243242 | 33723.4 |
| putative succinate semialdehyde dehydrogenase | NCTC13639_03566 | Not Available | Positive | 3243226 - 3244350 | 40199.1 |
| Trna-asn | Not Available | Not Available | Positive | 3244433 - 3244508 | Not Available |
| mate family multidrug exporter | NCTC13639_03568 | Not Available | Positive | 3244702 - 3245406 | 25198.3 |
| mate family multidrug exporter | NCTC13639_03569 | Not Available | Positive | 3245686 - 3246159 | 17999.4 |
| Trna-asn | Not Available | Not Available | Positive | 3246259 - 3246334 | Not Available |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

