Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carnitine operon protein caie | NCTC13639_03551 | Not Available | Negative | 3230800 - 3231396 | 21188.7 |
| phenylacetic acid degradation operon negative regulatory protein paax | NCTC13639_03552 | Not Available | Negative | 3231408 - 3232343 | 34832.4 |
| phenylacetate-coenzyme a ligase | NCTC13639_03553 | Not Available | Negative | 3232493 - 3233677 | 43653.4 |
| phenylacetate-coenzyme a ligase | NCTC13639_03554 | Not Available | Negative | 3233652 - 3233810 | 5954.05 |
| thiolase | NCTC13639_03555 | Not Available | Negative | 3233839 - 3235044 | 42321.0 |
| acyl-coenzyme a thioesterase paai | NCTC13639_03556 | Not Available | Negative | 3235044 - 3235466 | 15102.2 |
| fatty acid oxidation complex subunit alpha | NCTC13639_03557 | Not Available | Negative | 3235459 - 3236877 | 51032.2 |
| carnitinyl-coa dehydratase | NCTC13639_03558 | Not Available | Negative | 3236881 - 3237669 | 28473.3 |
| carnitinyl-coa dehydratase | NCTC13639_03559 | Not Available | Negative | 3237672 - 3238439 | 27378.2 |
| nadh oxidoreductase | NCTC13639_03560 | Not Available | Negative | 3238436 - 3239506 | 38542.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

