Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin superfamily protein | NCTC13639_03521 | Not Available | Positive | 3200867 - 3201988 | 42702.3 |
| peptidase t | NCTC13639_03522 | Not Available | Negative | 3202091 - 3203143 | 38083.6 |
| peptidase t | NCTC13639_03523 | Not Available | Negative | 3203172 - 3203318 | 5503.67 |
| putrescine/spermidine abc transporter atpase protein | NCTC13639_03524 | Not Available | Positive | 3203569 - 3204705 | 42953.6 |
| spermidine/putrescine abc transporter permease | NCTC13639_03525 | Not Available | Positive | 3204689 - 3205546 | 32260.3 |
| spermidine/putrescine abc transporter permease | NCTC13639_03526 | Not Available | Positive | 3205543 - 3206322 | 28526.2 |
| spermidine/putrescine abc transporter periplasmic substrate-binding protein | NCTC13639_03527 | Not Available | Positive | 3206347 - 3207396 | 39074.3 |
| nad-dependent deacetylase (regulatory protein sir homolog) | NCTC13639_03528 | Not Available | Negative | 3207496 - 3208317 | 31100.4 |
| n-acetyl-d-glucosamine kinase | NCTC13639_03529 | Not Available | Negative | 3208333 - 3209244 | 33098.6 |
| lipoprotein-releasing system transmembrane protein | NCTC13639_03530 | Not Available | Negative | 3209334 - 3210578 | 45117.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

