Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC13639_03501 | Not Available | Negative | 3185705 - 3185959 | 9698.43 |
| outer membrane protein x | NCTC13639_03502 | Not Available | Negative | 3185970 - 3186464 | 17116.4 |
| isocitrate dehydrogenase | NCTC13639_03503 | Not Available | Negative | 3186982 - 3187185 | 7495.13 |
| glutaredoxin | NCTC13639_03504 | Not Available | Negative | 3187429 - 3187854 | 15977.3 |
| arsenic efflux pump protein | NCTC13639_03505 | Not Available | Negative | 3187867 - 3189156 | 45478.1 |
| hth-type transcriptional repressor aser | NCTC13639_03506 | Not Available | Negative | 3189201 - 3189521 | 12109.9 |
| nadph azoreductase | NCTC13639_03507 | Not Available | Positive | 3189607 - 3190305 | 26317.5 |
| dna polymerase v subunit umud | NCTC13639_03508 | Not Available | Negative | 3190429 - 3190614 | 6895.46 |
| damage-inducible protein | NCTC13639_03509 | Not Available | Positive | 3190693 - 3190935 | 9265.2 |
| inner membrane protein yabi | NCTC13639_03510 | Not Available | Positive | 3191110 - 3191619 | 18535.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

