Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-succinylglutamate 5-semialdehyde dehydrogenase | NCTC13639_03431 | Not Available | Negative | 3117984 - 3119462 | 52837.9 |
| arginine succinyltransferase | NCTC13639_03432 | Not Available | Negative | 3119459 - 3120493 | 38452.0 |
| bifunctional succinylornithine transaminase/acetylornithine transaminase | NCTC13639_03433 | Not Available | Negative | 3120490 - 3121710 | 43508.9 |
| exonuclease iii | NCTC13639_03434 | Not Available | Positive | 3122080 - 3122961 | 33601.9 |
| tvp38/tmem64 family inner membrane protein ydjz | NCTC13639_03435 | Not Available | Positive | 3123281 - 3123841 | 20052.0 |
| tvp38/tmem64 family inner membrane protein ydjz | NCTC13639_03436 | Not Available | Positive | 3123838 - 3124536 | 25596.8 |
| abc-type uncharacterized transport system, periplasmic component | NCTC13639_03437 | Not Available | Positive | 3124568 - 3124711 | 5526.67 |
| putative abc transporter solute-binding protein | NCTC13639_03438 | Not Available | Positive | 3124740 - 3125738 | 36313.2 |
| inner membrane abc transporter permease protein ynjc | NCTC13639_03439 | Not Available | Positive | 3125711 - 3127246 | 55714.1 |
| abc transporter atp-binding protein | NCTC13639_03440 | Not Available | Positive | 3127246 - 3127878 | 22924.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

