Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase | NCTC13639_03275 | Not Available | Negative | 3003419 - 3003829 | 14917.1 |
| fad-binding oxidase | NCTC13639_03276 | Not Available | Negative | 3003826 - 3006882 | 113461.0 |
| putative inner membrane protein | NCTC13639_03277 | Not Available | Positive | 3007096 - 3008205 | 39714.5 |
| domain of uncharacterised function (duf1870) | NCTC13639_03279 | Not Available | Positive | 3008656 - 3009012 | 13956.7 |
| inner membrane transport protein ydim | NCTC13639_03280 | Not Available | Positive | 3009061 - 3010149 | 40128.7 |
| inner membrane transport protein ydin | NCTC13639_03281 | Not Available | Positive | 3010525 - 3011760 | 44816.4 |
| quinate/shikimate dehydrogenase | NCTC13639_03282 | Not Available | Positive | 3011782 - 3012648 | 31265.8 |
| 3-dehydroquinate dehydratase | NCTC13639_03283 | Not Available | Positive | 3012685 - 3013443 | 27420.2 |
| acetyl-coa:acetoacetyl-coa transferase subunit alpha | NCTC13639_03284 | Not Available | Positive | 3013599 - 3015194 | 57294.0 |
| crotonobetainyl-coa dehydrogenase | NCTC13639_03285 | Not Available | Positive | 3015208 - 3015687 | 17610.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

