Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein | NCTC13639_03264 | Not Available | Negative | 2994264 - 2994995 | 26640.4 |
| cysteine desufuration protein sufe | NCTC13639_03265 | Not Available | Negative | 2995318 - 2995524 | 7526.26 |
| bifunctional cysteine desulfurase/selenocysteine lyase | NCTC13639_03266 | Not Available | Negative | 2995653 - 2996873 | 44472.5 |
| cysteine desulfurase activator complex subunit sufd | NCTC13639_03267 | Not Available | Negative | 2996870 - 2998141 | 46952.7 |
| cysteine desulfurase atpase component | NCTC13639_03268 | Not Available | Negative | 2998116 - 2998862 | 27652.0 |
| cysteine desulfurase activator complex subunit sufb | NCTC13639_03269 | Not Available | Negative | 2998879 - 3000366 | 54676.0 |
| fe-s cluster assembly protein | NCTC13639_03270 | Not Available | Negative | 3000375 - 3000743 | 13420.0 |
| lysr family transcriptional regulator | NCTC13639_03272 | Not Available | Negative | 3001234 - 3002112 | 31346.0 |
| arsenate reductase and related proteins, glutaredoxin family | NCTC13639_03273 | Not Available | Positive | 3002235 - 3003086 | 30858.8 |
| uncharacterised protein | NCTC13639_03274 | Not Available | Negative | 3003153 - 3003455 | 11859.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

