Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribokinase | NCTC13639_03254 | Not Available | Positive | 2988004 - 2988393 | 14120.4 |
| ribokinase | NCTC13639_03255 | Not Available | Positive | 2988374 - 2988577 | 7153.56 |
| uncharacterized membrane protein | NCTC13639_03256 | Not Available | Positive | 2988590 - 2989327 | 27870.6 |
| l-amino acid amidase | NCTC13639_03257 | Not Available | Positive | 2989564 - 2990226 | 24635.3 |
| putrescine importer | NCTC13639_03258 | Not Available | Positive | 2990305 - 2990853 | 19919.2 |
| putrescine importer | NCTC13639_03259 | Not Available | Positive | 2990810 - 2991649 | 30399.7 |
| pyruvate kinase | NCTC13639_03260 | Not Available | Positive | 2992064 - 2993209 | 41416.2 |
| pyruvate kinase | NCTC13639_03261 | Not Available | Positive | 2993292 - 2993477 | 6290.63 |
| major outer membrane lipoprotein (murein-lipoprotein) | NCTC13639_03262 | Not Available | Positive | 2993787 - 2994038 | 8773.42 |
| peptidoglycan-binding protein | NCTC13639_03263 | Not Available | Negative | 2994092 - 2994301 | 7305.51 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

