Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoporphyrinogen oxidase | NCTC13639_03224 | Not Available | Negative | 2956993 - 2958225 | 45547.5 |
| uncharacterised protein | NCTC13639_03225 | Not Available | Negative | 2958210 - 2958395 | 6812.43 |
| predicted ester cyclase | NCTC13639_03226 | Not Available | Negative | 2958485 - 2958958 | 17402.5 |
| gamma-aminobutyraldehyde dehydrogenase | NCTC13639_03227 | Not Available | Negative | 2958970 - 2960397 | 51146.6 |
| dna-binding transcriptional repressor lldr | NCTC13639_03228 | Not Available | Positive | 2960713 - 2961438 | 26636.1 |
| uncharacterised protein | NCTC13639_03229 | Not Available | Positive | 2961463 - 2962161 | 26178.7 |
| aromatic amino acid transporter | NCTC13639_03230 | Not Available | Negative | 2962183 - 2963664 | 53688.4 |
| uncharacterised protein | NCTC13639_03231 | Not Available | Positive | 2963997 - 2964137 | 5167.89 |
| abc transporter substrate-binding protein | NCTC13639_03232 | Not Available | Positive | 2964347 - 2965180 | 29499.7 |
| atp-binding protein of abc transporter | NCTC13639_03233 | Not Available | Positive | 2965182 - 2966000 | 29895.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

