Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase/reductase | NCTC13639_03193 | Not Available | Negative | 2935623 - 2935982 | 12587.5 |
| 3-ketoacyl-(acyl-carrier-protein) reductase | NCTC13639_03194 | Not Available | Negative | 2935993 - 2936370 | 13503.2 |
| is2 transposase tnpb | NCTC13639_03195 | Not Available | Negative | 2936864 - 2937745 | 33390.5 |
| iscro1 transposase a | NCTC13639_03196 | Not Available | Negative | 2937703 - 2938098 | 14676.9 |
| deor family transcriptional regulator | NCTC13639_03197 | Not Available | Negative | 2938155 - 2938643 | 18506.5 |
| uncharacterised protein | NCTC13639_03198 | Not Available | Negative | 2938988 - 2939098 | 3983.01 |
| predicted transcriptional regulator | NCTC13639_03199 | Not Available | Positive | 2939448 - 2939753 | 11866.4 |
| protein of uncharacterised function (duf1120) | NCTC13639_03200 | Not Available | Positive | 2939979 - 2940683 | 24881.6 |
| putative periplasmic chaperone protein | NCTC13639_03201 | Not Available | Positive | 2940783 - 2941487 | 26231.1 |
| fimbrial usher protein | NCTC13639_03202 | Not Available | Positive | 2941609 - 2944023 | 88285.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

