Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative monooxygenase ydhr | NCTC13639_03183 | Not Available | Positive | 2924672 - 2924980 | 11647.7 |
| endoribonuclease | NCTC13639_03184 | Not Available | Positive | 2925203 - 2925598 | 14053.5 |
| threonine dehydratase | NCTC13639_03185 | Not Available | Positive | 2925626 - 2926594 | 34596.5 |
| dna binding protein | NCTC13639_03186 | Not Available | Positive | 2926722 - 2927363 | 23485.9 |
| oxidoreductase molybdopterin binding domain | NCTC13639_03187 | Not Available | Positive | 2927773 - 2928267 | 18280.2 |
| signal transduction protein | NCTC13639_03188 | Not Available | Positive | 2928285 - 2930249 | 73916.2 |
| vitamin b12 transport periplasmic protein (glutathione peroxidase) | NCTC13639_03189 | Not Available | Positive | 2930334 - 2930816 | 17735.4 |
| putative inner membrane protein | NCTC13639_03190 | Not Available | Positive | 2930982 - 2932091 | 40338.2 |
| signal transduction protein | NCTC13639_03191 | Not Available | Positive | 2932211 - 2933995 | 66573.4 |
| tryptophanyl-trna synthetase ii | NCTC13639_03192 | Not Available | Positive | 2934198 - 2935202 | 36557.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

