Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | NCTC13639_03172 | Not Available | Positive | 2913632 - 2914069 | 15756.5 |
| major facilitator superfamily protein | NCTC13639_03173 | Not Available | Negative | 2914251 - 2915420 | 40183.5 |
| dna-binding transcriptional repressor purr | NCTC13639_03175 | Not Available | Positive | 2915983 - 2917008 | 38106.8 |
| putative dna-binding transcriptional regulator | NCTC13639_03176 | Not Available | Negative | 2917005 - 2917937 | 35141.7 |
| inner membrane transport protein ydhc | NCTC13639_03177 | Not Available | Positive | 2918048 - 2919256 | 43268.7 |
| cyclopropane fatty acyl phospholipid synthase | NCTC13639_03178 | Not Available | Positive | 2919547 - 2920695 | 43845.3 |
| riboflavin synthase subunit alpha | NCTC13639_03179 | Not Available | Negative | 2920737 - 2921384 | 23475.4 |
| multidrug efflux protein | NCTC13639_03180 | Not Available | Positive | 2921602 - 2922975 | 49443.0 |
| 23s rrna/trna pseudouridine synthase a | NCTC13639_03181 | Not Available | Negative | 2923015 - 2923713 | 25997.8 |
| uncharacterized isomerase ydde | NCTC13639_03182 | Not Available | Positive | 2923844 - 2924635 | 29291.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

