Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine kinase | NCTC13639_03152 | Not Available | Negative | 2897924 - 2898784 | 31098.6 |
| tyrosyl-trna synthetase | NCTC13639_03153 | Not Available | Negative | 2898849 - 2900123 | 47389.3 |
| pyridoxamine 5'-phosphate oxidase | NCTC13639_03154 | Not Available | Negative | 2900250 - 2900906 | 25422.4 |
| lysozyme inhibitor | NCTC13639_03155 | Not Available | Negative | 2900966 - 2901289 | 12328.9 |
| anhydro-n-acetylmuramic acid kinase | NCTC13639_03156 | Not Available | Negative | 2901383 - 2902504 | 40067.4 |
| outer membrane lipoprotein | NCTC13639_03157 | Not Available | Positive | 2902779 - 2903246 | 15513.7 |
| transcriptional regulator slya | NCTC13639_03158 | Not Available | Negative | 2903294 - 2903728 | 16330.0 |
| protein of uncharacterised function (duf1656) | NCTC13639_03159 | Not Available | Positive | 2903927 - 2904163 | 9005.54 |
| hemolysin d | NCTC13639_03160 | Not Available | Positive | 2904238 - 2905029 | 29234.7 |
| efflux pump protein | NCTC13639_03161 | Not Available | Positive | 2905026 - 2907041 | 75479.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

