Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ydgk | NCTC13639_03142 | Not Available | Positive | 2888213 - 2888653 | 16287.5 |
| na(+)-translocating nadh-quinone reductase subunit e | NCTC13639_03143 | Not Available | Positive | 2888730 - 2889311 | 20870.8 |
| electron transport complex protein rnfb | NCTC13639_03144 | Not Available | Positive | 2889311 - 2889889 | 20545.9 |
| electron transport complex protein rnfc | NCTC13639_03145 | Not Available | Positive | 2889882 - 2891999 | 75962.0 |
| electron transport complex protein | NCTC13639_03146 | Not Available | Positive | 2892000 - 2892902 | 32588.4 |
| electron transport complex protein rnfg | NCTC13639_03147 | Not Available | Positive | 2893061 - 2893681 | 21986.1 |
| electron transport complex protein | NCTC13639_03148 | Not Available | Positive | 2893685 - 2894380 | 24392.5 |
| endonuclease iii | NCTC13639_03149 | Not Available | Positive | 2894377 - 2895012 | 23535.6 |
| putative tripeptide transporter permease | NCTC13639_03150 | Not Available | Positive | 2895626 - 2897131 | 54420.9 |
| glutathione s-transferase | NCTC13639_03151 | Not Available | Positive | 2897236 - 2897841 | 22509.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

