Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor protein rstb | NCTC13639_03112 | Not Available | Positive | 2858585 - 2859886 | 49219.8 |
| dna replication terminus site-binding protein | NCTC13639_03113 | Not Available | Positive | 2859960 - 2860889 | 35685.2 |
| fumarate hydratase | NCTC13639_03114 | Not Available | Negative | 2860886 - 2862289 | 50618.1 |
| fumarate hydratase class i, aerobic | NCTC13639_03115 | Not Available | Negative | 2862431 - 2863774 | 48747.1 |
| fumarate hydratase class i, aerobic | NCTC13639_03116 | Not Available | Negative | 2863731 - 2864078 | 13185.5 |
| mannose-6-phosphate isomerase | NCTC13639_03117 | Not Available | Positive | 2864341 - 2864445 | 3694.37 |
| mannose-6-phosphate isomerase | NCTC13639_03118 | Not Available | Positive | 2864408 - 2864731 | 11546.8 |
| mannose-6-phosphate isomerase | NCTC13639_03119 | Not Available | Positive | 2864975 - 2865511 | 19004.8 |
| bacterial protein of uncharacterised function (duf945) | NCTC13639_03120 | Not Available | Positive | 2865628 - 2866188 | 20280.4 |
| bacterial protein of uncharacterised function (duf945) | NCTC13639_03121 | Not Available | Positive | 2866223 - 2867137 | 33088.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

