Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative metalloprotease ypwa | NCTC13639_03092 | Not Available | Positive | 2839312 - 2840511 | 44908.1 |
| thermostable carboxypeptidase 1 | NCTC13639_03093 | Not Available | Positive | 2840519 - 2840800 | 10628.4 |
| acid shock protein | NCTC13639_03094 | Not Available | Positive | 2840938 - 2841345 | 13958.9 |
| protease | NCTC13639_03095 | Not Available | Positive | 2841605 - 2842426 | 29435.0 |
| multidrug efflux system protein mdtj | NCTC13639_03096 | Not Available | Negative | 2842779 - 2843081 | 10679.6 |
| putative transport protein | NCTC13639_03097 | Not Available | Positive | 2843563 - 2844597 | 37385.2 |
| pyridine nucleotide transhydrogenase | NCTC13639_03098 | Not Available | Negative | 2844644 - 2846032 | 48874.1 |
| nad(p) transhydrogenase subunit alpha | NCTC13639_03099 | Not Available | Negative | 2846043 - 2847572 | 54467.3 |
| protein of uncharacterised function (duf1471) | NCTC13639_03100 | Not Available | Positive | 2848098 - 2848412 | 10981.9 |
| protein of uncharacterised function (duf1471) | NCTC13639_03101 | Not Available | Positive | 2848420 - 2849043 | 22518.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

