Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | NCTC13639_03082 | Not Available | Negative | 2832096 - 2833004 | 33658.0 |
| major facilitator superfamily protein | NCTC13639_03083 | Not Available | Positive | 2833112 - 2834188 | 38968.5 |
| putative transfer inhibition protein | NCTC13639_03084 | Not Available | Negative | 2834397 - 2835086 | 26051.9 |
| two-component sensor kinase | NCTC13639_03085 | Not Available | Negative | 2835230 - 2835664 | 15796.2 |
| hamp domain | NCTC13639_03086 | Not Available | Negative | 2835793 - 2836185 | 14359.2 |
| uncharacterised protein | NCTC13639_03087 | Not Available | Negative | 2836231 - 2836722 | 18501.2 |
| transcriptional regulator phob | NCTC13639_03088 | Not Available | Negative | 2836719 - 2837441 | 27343.0 |
| putative sulfite oxidase subunit yedy | NCTC13639_03089 | Not Available | Positive | 2837631 - 2838074 | 16100.2 |
| putative sulfite oxidase subunit yedy | NCTC13639_03090 | Not Available | Positive | 2838016 - 2838576 | 21264.8 |
| putative sulfite oxidase subunit yedz | NCTC13639_03091 | Not Available | Positive | 2838637 - 2839263 | 23719.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

