Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative mfs-type transporter ydee | NCTC13639_03051 | Not Available | Positive | 2802078 - 2803370 | 45819.8 |
| abc transporter atp-binding protein | NCTC13639_03052 | Not Available | Negative | 2803310 - 2804008 | 25678.3 |
| abc transporter atp-binding protein | NCTC13639_03053 | Not Available | Negative | 2804018 - 2804815 | 29403.4 |
| branched-chain amino acid transport system, permease component | NCTC13639_03054 | Not Available | Negative | 2804815 - 2805888 | 38793.0 |
| branched-chain amino acid transport system, permease component | NCTC13639_03055 | Not Available | Negative | 2805888 - 2807462 | 56745.4 |
| substrate-binding periplasmic transport protein | NCTC13639_03056 | Not Available | Negative | 2807506 - 2808777 | 45920.6 |
| signaling protein | NCTC13639_03058 | Not Available | Negative | 2809643 - 2810569 | 35180.2 |
| uncharacterised protein | NCTC13639_03059 | Not Available | Negative | 2810753 - 2811199 | 16123.1 |
| dipeptidyl carboxypeptidase ii | NCTC13639_03060 | Not Available | Negative | 2811700 - 2813745 | 77324.2 |
| 3-hydroxy acid dehydrogenase | NCTC13639_03061 | Not Available | Positive | 2813883 - 2814629 | 27292.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

