Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative chaperone protein ecpd | NCTC13639_03001 | Not Available | Positive | 2763084 - 2763797 | 26168.8 |
| fimbrial usher protein | NCTC13639_03002 | Not Available | Positive | 2763784 - 2766261 | 90300.5 |
| fimbrial adhesin | NCTC13639_03003 | Not Available | Positive | 2766258 - 2767601 | 47892.0 |
| putative chaperone protein ecpd | NCTC13639_03004 | Not Available | Positive | 2767609 - 2767827 | 7696.14 |
| fimbrial chaperone protein fimc | NCTC13639_03005 | Not Available | Positive | 2767847 - 2768266 | 15426.3 |
| transcriptional regulator | NCTC13639_03006 | Not Available | Positive | 2768322 - 2769086 | 29475.5 |
| uncharacterised protein | NCTC13639_03007 | Not Available | Positive | 2769073 - 2769543 | 17804.2 |
| probable addiction module antidote protein | NCTC13639_03008 | Not Available | Negative | 2769787 - 2769960 | 6636.86 |
| t2ss protein d | NCTC13639_03009 | Not Available | Negative | 2770134 - 2771396 | 45948.1 |
| zonula occludens toxin | NCTC13639_03010 | Not Available | Negative | 2771393 - 2772427 | 38540.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

