Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein ii (aspartate chemoreceptor protein) | NCTC13639_02991 | Not Available | Positive | 2748229 - 2748975 | 25993.4 |
| transcriptional regulator, y4mf family | NCTC13639_02992 | Not Available | Positive | 2749155 - 2749469 | 11450.9 |
| serine/threonine-protein kinase hipa | NCTC13639_02993 | Not Available | Positive | 2749462 - 2750733 | 47383.5 |
| uncharacterised protein | NCTC13639_02994 | Not Available | Positive | 2750788 - 2751306 | 19190.0 |
| lipoprotein | NCTC13639_02995 | Not Available | Negative | 2751303 - 2752670 | 51475.1 |
| uncharacterized conserved protein (duf2132) | NCTC13639_02996 | Not Available | Negative | 2752683 - 2752970 | 10906.8 |
| membrane fusion protein of t1ss | NCTC13639_02997 | Not Available | Negative | 2753105 - 2754430 | 49092.4 |
| atp-binding protein of t1ss | NCTC13639_02998 | Not Available | Negative | 2754433 - 2756172 | 62964.4 |
| cyclolysin | NCTC13639_02999 | Not Available | Negative | 2756183 - 2761513 | 187683.0 |
| major fimbrial subunit | NCTC13639_03000 | Not Available | Positive | 2762515 - 2763069 | 18752.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

