Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide transporter atp-binding component | NCTC13639_02981 | Not Available | Negative | 2740152 - 2741138 | 36059.0 |
| atp-dependent peptide transporter membrane subunit | NCTC13639_02982 | Not Available | Negative | 2741135 - 2742031 | 32024.0 |
| dipeptide transporter permease dppb | NCTC13639_02983 | Not Available | Negative | 2742028 - 2743050 | 37464.5 |
| dipeptide abc transporter substrate-binding protein | NCTC13639_02984 | Not Available | Negative | 2743095 - 2744051 | 35773.7 |
| dipeptide abc transporter substrate-binding protein | NCTC13639_02985 | Not Available | Negative | 2744005 - 2744715 | 25692.5 |
| d-alanyl-d-alanine dipeptidase | NCTC13639_02986 | Not Available | Negative | 2744673 - 2745260 | 21420.9 |
| bifunctional glucokinase/rpir family transcriptional regulator | NCTC13639_02987 | Not Available | Negative | 2745343 - 2746143 | 29734.7 |
| acid-resistance protein | NCTC13639_02988 | Not Available | Positive | 2746545 - 2746727 | 6146.32 |
| 10k-l protein | NCTC13639_02989 | Not Available | Positive | 2746696 - 2746875 | 6728.96 |
| methyl-accepting chemotaxis protein mcpc | NCTC13639_02990 | Not Available | Positive | 2747031 - 2748224 | 43834.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

