Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stationary-phase-induced ribosome-associated protein (sra) (protein d) (30s ribosomal protein s22) | NCTC13639_02971 | Not Available | Negative | 2731615 - 2731755 | 5239.3 |
| peroxiredoxin (osmotically-inducible protein c) | NCTC13639_02972 | Not Available | Positive | 2731983 - 2732414 | 15081.0 |
| short chain dehydrogenase | NCTC13639_02973 | Not Available | Negative | 2732462 - 2733232 | 26978.3 |
| h+/gluconate symporter and related permeases | NCTC13639_02974 | Not Available | Negative | 2733244 - 2734635 | 48641.6 |
| multifunctional fatty acid oxidation complex subunit alpha | NCTC13639_02975 | Not Available | Negative | 2734676 - 2735599 | 33744.8 |
| acetyl-coa acetyltransferase | NCTC13639_02976 | Not Available | Negative | 2735589 - 2736794 | 41375.6 |
| acetate coa-transferase beta subunit | NCTC13639_02977 | Not Available | Negative | 2736805 - 2737461 | 23166.5 |
| coa-transferase subunit alpha | NCTC13639_02978 | Not Available | Negative | 2737464 - 2738171 | 25417.6 |
| lysr family transcriptional regulator | NCTC13639_02979 | Not Available | Positive | 2738314 - 2739204 | 32658.8 |
| oligopeptide abc transporter atp-binding protein | NCTC13639_02980 | Not Available | Negative | 2739224 - 2740159 | 34834.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

