Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC13639_02950 | Not Available | Negative | 2704234 - 2705961 | 64832.9 |
| uncharacterized isomerase ydde | NCTC13639_02951 | Not Available | Negative | 2706516 - 2707409 | 31981.2 |
| respiratory nitrate reductase 2 subunit gamma | NCTC13639_02952 | Not Available | Negative | 2707508 - 2708188 | 25726.1 |
| respiratory nitrate reductase 2 subunit delta | NCTC13639_02953 | Not Available | Negative | 2708185 - 2708880 | 25937.7 |
| respiratory nitrate reductase 2 subunit beta | NCTC13639_02954 | Not Available | Negative | 2708880 - 2709200 | 12078.1 |
| respiratory nitrate reductase 2 subunit beta | NCTC13639_02955 | Not Available | Negative | 2709197 - 2710423 | 46546.9 |
| respiratory nitrate reductase 2 subunit alpha | NCTC13639_02956 | Not Available | Negative | 2710420 - 2714160 | 140316.0 |
| nitrite extrusion protein | NCTC13639_02957 | Not Available | Negative | 2714210 - 2715595 | 49552.7 |
| tetr family transcriptional regulator | NCTC13639_02958 | Not Available | Negative | 2715807 - 2716385 | 21515.9 |
| methyl viologen resistance protein smva | NCTC13639_02959 | Not Available | Positive | 2716502 - 2717986 | 51792.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

