Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted acetyltransferase | NCTC13639_02940 | Not Available | Positive | 2696588 - 2697097 | 19297.8 |
| cystine abc transporter permease | NCTC13639_02941 | Not Available | Positive | 2697107 - 2698033 | 34231.7 |
| atp-binding protein of abc transporter | NCTC13639_02942 | Not Available | Positive | 2698017 - 2698790 | 28301.1 |
| quinone oxidoreductase, nadph-dependent | NCTC13639_02943 | Not Available | Negative | 2698827 - 2699816 | 35756.0 |
| lysr family transcriptional regulator | NCTC13639_02944 | Not Available | Negative | 2699915 - 2700835 | 34370.4 |
| glutathione s-transferase | NCTC13639_02945 | Not Available | Positive | 2700948 - 2701565 | 23336.2 |
| laci family transcriptional regulator | NCTC13639_02946 | Not Available | Positive | 2701562 - 2701996 | 16240.4 |
| flavin reductase-like protein | NCTC13639_02947 | Not Available | Negative | 2702025 - 2702597 | 21007.2 |
| n-hydroxyarylamine o-acetyltransferase | NCTC13639_02948 | Not Available | Positive | 2702755 - 2703600 | 32196.2 |
| uncharacterised protein | NCTC13639_02949 | Not Available | Negative | 2703779 - 2704192 | 15840.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

