Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | NCTC13639_02930 | Not Available | Positive | 2685007 - 2685582 | 21467.8 |
| zinc-binding dehydrogenase | NCTC13639_02931 | Not Available | Positive | 2685641 - 2686675 | 37496.1 |
| streptogramin lyase | NCTC13639_02932 | Not Available | Positive | 2686940 - 2688001 | 38421.9 |
| lipoprotein | NCTC13639_02933 | Not Available | Positive | 2688139 - 2688360 | 7867.42 |
| putative proline-specific permease | NCTC13639_02934 | Not Available | Negative | 2688403 - 2689845 | 52139.9 |
| aerotaxis receptor protein | NCTC13639_02935 | Not Available | Negative | 2690125 - 2691666 | 56485.9 |
| monooxygenase | NCTC13639_02936 | Not Available | Positive | 2692174 - 2693172 | 36006.9 |
| hydrolase | NCTC13639_02937 | Not Available | Positive | 2693172 - 2694293 | 40375.1 |
| alkanesulfonate monooxygenase | NCTC13639_02938 | Not Available | Positive | 2694319 - 2695632 | 48394.5 |
| cystine transporter subunit | NCTC13639_02939 | Not Available | Positive | 2695645 - 2696577 | 32870.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

