Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane transport protein ydhc | NCTC13639_02920 | Not Available | Negative | 2672747 - 2673874 | 40457.7 |
| hth-type transcriptional repressor of iron proteins a | NCTC13639_02921 | Not Available | Positive | 2673955 - 2674755 | 30280.5 |
| protein of uncharacterised function (duf2566) | NCTC13639_02922 | Not Available | Positive | 2675164 - 2675337 | 6608.51 |
| virulence effector protein | NCTC13639_02923 | Not Available | Negative | 2675357 - 2677519 | 81338.6 |
| virulence effector protein | NCTC13639_02924 | Not Available | Negative | 2677516 - 2680497 | 110918.0 |
| virulence effector protein | NCTC13639_02925 | Not Available | Negative | 2680502 - 2681809 | 47027.6 |
| dipeptide abc transporter substrate-binding protein | NCTC13639_02926 | Not Available | Positive | 2682092 - 2683690 | 59384.2 |
| protein of uncharacterised function (duf2526) | NCTC13639_02927 | Not Available | Positive | 2683708 - 2683941 | 8851.42 |
| inner membrane protein ydcz | NCTC13639_02928 | Not Available | Negative | 2684005 - 2684454 | 15832.1 |
| acetyltransferase | NCTC13639_02929 | Not Available | Negative | 2684451 - 2684969 | 19513.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

