Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit | NCTC13639_02880 | Not Available | Negative | 2635728 - 2636093 | 13593.2 |
| formate dehydrogenase, nitrate-inducible, major subunit | NCTC13639_02881 | Not Available | Negative | 2636194 - 2639244 | 112888.0 |
| inner membrane protein ykgb | NCTC13639_02882 | Not Available | Positive | 2639769 - 2640371 | 22408.2 |
| uncharacterized conserved protein | NCTC13639_02883 | Not Available | Positive | 2640406 - 2640864 | 16905.6 |
| transcriptional repressor frmr | NCTC13639_02884 | Not Available | Positive | 2640976 - 2641263 | 10595.2 |
| alcohol dehydrogenase | NCTC13639_02885 | Not Available | Positive | 2641296 - 2642414 | 39289.4 |
| methyl-accepting chemotaxis protein iii (ribose an galactose chemoreceptor protein) | NCTC13639_02886 | Not Available | Positive | 2642584 - 2644272 | 60347.9 |
| lysr family transcriptional regulator | NCTC13639_02887 | Not Available | Negative | 2644404 - 2645327 | 33528.0 |
| probable manganese-dependent inorganic pyrophosphatase | NCTC13639_02888 | Not Available | Positive | 2645470 - 2645730 | 9691.55 |
| probable manganese-dependent inorganic pyrophosphatase | NCTC13639_02889 | Not Available | Positive | 2645669 - 2646373 | 25674.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

