Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase hrpa | NCTC13639_02870 | Not Available | Positive | 2623568 - 2627326 | 143170.0 |
| duf218 domain | NCTC13639_02871 | Not Available | Positive | 2627413 - 2628204 | 29019.3 |
| aldehyde dehydrogenase | NCTC13639_02872 | Not Available | Positive | 2628404 - 2629843 | 52270.0 |
| predicted esterase | NCTC13639_02873 | Not Available | Negative | 2629885 - 2630811 | 33933.6 |
| glyceraldehyde-3-phosphate dehydrogenase c | NCTC13639_02874 | Not Available | Negative | 2630938 - 2631939 | 35919.1 |
| cytochrome b561 | NCTC13639_02875 | Not Available | Positive | 2632129 - 2632659 | 20121.7 |
| dna polymerase v subunit umud | NCTC13639_02876 | Not Available | Positive | 2632832 - 2633251 | 15102.3 |
| dna polymerase v subunit umuc | NCTC13639_02877 | Not Available | Positive | 2633254 - 2634522 | 47631.4 |
| formate dehydrogenase-n subunit gamma | NCTC13639_02878 | Not Available | Negative | 2634645 - 2635298 | 25418.0 |
| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit | NCTC13639_02879 | Not Available | Negative | 2635291 - 2635605 | 11352.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

