Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC13639_02487 | Not Available | Positive | 2287217 - 2287420 | 7457.56 |
| uncharacterised protein | NCTC13639_02488 | Not Available | Positive | 2287459 - 2287671 | 7591.99 |
| Internal virion protein d | NCTC13639_02489 | Not Available | Positive | 2287637 - 2289079 | 52382.3 |
| Tail/dna circulation protein | NCTC13639_02490 | Not Available | Positive | 2289423 - 2290826 | 49952.9 |
| Tail protein | NCTC13639_02491 | Not Available | Positive | 2290823 - 2291908 | 40607.6 |
| Putative base plate assembly protein | NCTC13639_02492 | Not Available | Positive | 2291981 - 2292490 | 18209.3 |
| Hypothetical protein | NCTC13639_02493 | Not Available | Positive | 2292487 - 2292924 | 16987.9 |
| Base plate j protein | NCTC13639_02494 | Not Available | Positive | 2292926 - 2294068 | 40105.5 |
| Tail protein | NCTC13639_02495 | Not Available | Positive | 2294065 - 2294658 | 21076.0 |
| Putative tail fiber protein | NCTC13639_02496 | Not Available | Positive | 2294710 - 2295171 | 16124.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

