Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf2534) | NCTC13639_02772 | Not Available | Positive | 2544803 - 2545063 | 9417.96 |
| universal stress protein uspe | NCTC13639_02773 | Not Available | Negative | 2545112 - 2546062 | 35829.2 |
| fumarate/nitrate reduction transcriptional regulator | NCTC13639_02774 | Not Available | Negative | 2546214 - 2546966 | 27912.9 |
| o-6-alkylguanine-dna:cysteine-protein methyltransferase | NCTC13639_02775 | Not Available | Negative | 2547161 - 2547676 | 19045.8 |
| probable dna endonuclease smra | NCTC13639_02776 | Not Available | Positive | 2547902 - 2548216 | 11734.0 |
| probable dna endonuclease smra | NCTC13639_02777 | Not Available | Positive | 2549337 - 2549792 | 17211.9 |
| signaling protein | NCTC13639_02778 | Not Available | Negative | 2549805 - 2551037 | 46441.1 |
| signal transduction protein | NCTC13639_02779 | Not Available | Negative | 2551193 - 2553220 | 74580.1 |
| methyl-accepting chemotaxis protein ii (aspartate chemoreceptor protein) | NCTC13639_02780 | Not Available | Positive | 2553632 - 2554741 | 39983.1 |
| zinc transporter | NCTC13639_02781 | Not Available | Positive | 2554896 - 2555879 | 36684.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

