Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ycis | NCTC13639_02712 | Not Available | Positive | 2496290 - 2496598 | 11334.1 |
| tetratricopeptide repeat protein | NCTC13639_02713 | Not Available | Positive | 2496605 - 2497567 | 36285.7 |
| tetratricopeptide repeat protein | NCTC13639_02714 | Not Available | Positive | 2497567 - 2497773 | 7969.61 |
| orotidine 5'-phosphate decarboxylase | NCTC13639_02715 | Not Available | Positive | 2497964 - 2498701 | 26327.7 |
| translation initiation factor sui1 | NCTC13639_02716 | Not Available | Positive | 2498702 - 2499028 | 11437.9 |
| lipoprotein | NCTC13639_02717 | Not Available | Negative | 2499120 - 2499338 | 6942.56 |
| deor family transcriptional regulator | NCTC13639_02718 | Not Available | Negative | 2499607 - 2500359 | 27570.1 |
| uncharacterised protein | NCTC13639_02719 | Not Available | Negative | 2500455 - 2500637 | 6811.17 |
| uncharacterised protein | NCTC13639_02720 | Not Available | Positive | 2500673 - 2500930 | 9873.15 |
| rnase ii stability modulator | NCTC13639_02721 | Not Available | Negative | 2500820 - 2502616 | 67541.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

