Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC13639_02691 | Not Available | Positive | 2472439 - 2472714 | 10111.2 |
| diguanylate cyclase yddv | NCTC13639_02692 | Not Available | Positive | 2472901 - 2474373 | 55229.0 |
| tryptophan synthase subunit alpha | NCTC13639_02693 | Not Available | Negative | 2474406 - 2475212 | 28674.6 |
| bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase | NCTC13639_02694 | Not Available | Negative | 2475212 - 2477773 | 92799.1 |
| bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase | NCTC13639_02695 | Not Available | Negative | 2477777 - 2479372 | 56880.4 |
| anthranilate synthase component i | NCTC13639_02696 | Not Available | Negative | 2479372 - 2480934 | 57255.5 |
| phosphoesterase | NCTC13639_02698 | Not Available | Positive | 2481209 - 2482087 | 32612.0 |
| putative ribosome maturation factor | NCTC13639_02699 | Not Available | Positive | 2482084 - 2482704 | 23128.1 |
| 23s rrna pseudouridylate synthase b | NCTC13639_02700 | Not Available | Positive | 2482805 - 2483680 | 32716.4 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | NCTC13639_02701 | Not Available | Negative | 2483764 - 2484354 | 21842.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

