Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator narl | NCTC13639_02648 | Not Available | Negative | 2430322 - 2430972 | 23849.2 |
| nitrate/nitrite sensor protein narx | NCTC13639_02649 | Not Available | Negative | 2430965 - 2432761 | 66958.5 |
| nitrite extrusion protein | NCTC13639_02650 | Not Available | Positive | 2433102 - 2434493 | 49664.2 |
| respiratory nitrate reductase 1 subunit alpha | NCTC13639_02651 | Not Available | Positive | 2435008 - 2438751 | 140645.0 |
| respiratory nitrate reductase 1 subunit beta | NCTC13639_02652 | Not Available | Positive | 2438748 - 2439314 | 21436.6 |
| respiratory nitrate reductase 1 subunit beta | NCTC13639_02653 | Not Available | Positive | 2439277 - 2440287 | 37687.2 |
| respiratory nitrate reductase 1 subunit delta | NCTC13639_02654 | Not Available | Positive | 2440284 - 2440994 | 26403.1 |
| respiratory nitrate reductase 1 subunit gamma | NCTC13639_02655 | Not Available | Positive | 2440994 - 2441671 | 25518.9 |
| Trna-tyr | Not Available | Not Available | Positive | 2442259 - 2442343 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2442556 - 2442640 | Not Available |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

