Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | NCTC13639_02638 | Not Available | Positive | 2421518 - 2422600 | 40490.6 |
| protein methyltransferase hemk (protein-glutamine n methyltransferase) | NCTC13639_02639 | Not Available | Positive | 2422600 - 2423433 | 30657.6 |
| putative transcriptional regulator | NCTC13639_02640 | Not Available | Positive | 2423430 - 2423822 | 14704.7 |
| putative transcriptional regulator | NCTC13639_02641 | Not Available | Positive | 2423928 - 2424635 | 27163.7 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | NCTC13639_02642 | Not Available | Positive | 2424671 - 2425525 | 30754.2 |
| calcium/sodium:proton antiporter | NCTC13639_02643 | Not Available | Negative | 2425624 - 2426724 | 39215.9 |
| cation transport protein | NCTC13639_02644 | Not Available | Positive | 2427128 - 2427823 | 25323.7 |
| domain of uncharacterised function (duf1883) | NCTC13639_02645 | Not Available | Negative | 2427878 - 2428123 | 9080.83 |
| uncharacterized conserved protein involved in intracellular sulfur reduction | NCTC13639_02646 | Not Available | Negative | 2428386 - 2428739 | 12578.4 |
| intimin-like protein | NCTC13639_02647 | Not Available | Positive | 2428915 - 2430300 | 51555.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

