Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic di-gmp binding protein ycgr | NCTC13639_02598 | Not Available | Negative | 2379301 - 2379876 | 21503.9 |
| transglycosylase associated protein | NCTC13639_02599 | Not Available | Positive | 2380078 - 2380332 | 8613.09 |
| vitamin b12/cobalamin outer membrane transporter | NCTC13639_02600 | Not Available | Negative | 2380374 - 2382344 | 73248.5 |
| molybdenum transport protein modd | NCTC13639_02601 | Not Available | Negative | 2382368 - 2383225 | 30248.4 |
| trans-aconitate 2-methyltransferase | NCTC13639_02602 | Not Available | Negative | 2383222 - 2384034 | 31082.1 |
| ferric enterobactin transport atp-binding protein | NCTC13639_02603 | Not Available | Negative | 2384044 - 2384805 | 27306.4 |
| vtamin b12-transporter permease | NCTC13639_02604 | Not Available | Negative | 2384802 - 2385788 | 34687.9 |
| abc-type fe3+-citrate transport system, periplasmic component | NCTC13639_02605 | Not Available | Negative | 2385788 - 2386312 | 19423.4 |
| uncharacterised protein | NCTC13639_02606 | Not Available | Negative | 2386270 - 2386809 | 19461.8 |
| trehalase | NCTC13639_02607 | Not Available | Negative | 2387017 - 2388729 | 63666.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

