Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino acid dehydrogenase small subunit | NCTC13639_02588 | Not Available | Positive | 2373385 - 2374476 | 40367.5 |
| uncharacterised protein | NCTC13639_02589 | Not Available | Positive | 2374493 - 2374624 | 4762.72 |
| alanine racemase | NCTC13639_02590 | Not Available | Positive | 2374590 - 2374955 | 13789.7 |
| alanine racemase | NCTC13639_02591 | Not Available | Positive | 2374952 - 2375563 | 21482.8 |
| cell volume regulation protein a | NCTC13639_02592 | Not Available | Negative | 2375669 - 2376229 | 20692.5 |
| cell volume regulation protein a | NCTC13639_02593 | Not Available | Negative | 2376168 - 2377406 | 43498.1 |
| l,d-carboxypeptidase a | NCTC13639_02594 | Not Available | Negative | 2377504 - 2377965 | 16610.1 |
| l,d-carboxypeptidase a | NCTC13639_02595 | Not Available | Negative | 2377934 - 2378419 | 17575.0 |
| membrane-bound lytic murein transglycosylase e | NCTC13639_02596 | Not Available | Positive | 2378627 - 2378881 | 8893.59 |
| membrane-bound lytic murein transglycosylase e | NCTC13639_02597 | Not Available | Positive | 2378863 - 2379129 | 9656.56 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

