Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC13639_02546 | Not Available | Negative | 2338435 - 2338674 | 8384.55 |
| phopq regulatory protein | NCTC13639_02547 | Not Available | Positive | 2338839 - 2338982 | 5560.21 |
| uncharacterised protein | NCTC13639_02548 | Not Available | Positive | 2339057 - 2339341 | 10401.5 |
| penicillin-binding protein | NCTC13639_02550 | Not Available | Positive | 2340563 - 2342308 | 63062.8 |
| 23s rrna methyltransferase a | NCTC13639_02551 | Not Available | Positive | 2342372 - 2343181 | 29891.8 |
| putative sporulation protein ytaf | NCTC13639_02552 | Not Available | Negative | 2343178 - 2343744 | 20131.3 |
| predicted membrane protein | NCTC13639_02553 | Not Available | Negative | 2344176 - 2344634 | 17853.5 |
| mannose-specific pts system eiid component | NCTC13639_02554 | Not Available | Negative | 2344695 - 2345546 | 30872.4 |
| mannose-specific pts system eiic component | NCTC13639_02555 | Not Available | Negative | 2345559 - 2346359 | 27510.4 |
| mannose-specific pts system eiiab component | NCTC13639_02556 | Not Available | Negative | 2346418 - 2347380 | 34802.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

