Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf1480) | NCTC13639_02536 | Not Available | Negative | 2325660 - 2325899 | 8891.49 |
| rrna (cytosine-c(5)-)-methyltransferase rsmf | NCTC13639_02537 | Not Available | Negative | 2325997 - 2327418 | 52682.7 |
| paraquat-inducible protein b | NCTC13639_02538 | Not Available | Negative | 2327498 - 2330131 | 94812.6 |
| paraquat-inducible protein a | NCTC13639_02539 | Not Available | Negative | 2330100 - 2331383 | 48151.3 |
| signal transduction protein | NCTC13639_02540 | Not Available | Positive | 2331512 - 2332009 | 18027.4 |
| putative solute/dna competence effector | NCTC13639_02541 | Not Available | Positive | 2332106 - 2332792 | 25398.4 |
| carboxy-terminal protease | NCTC13639_02542 | Not Available | Positive | 2332812 - 2334860 | 76598.1 |
| heat shock protein htpx | NCTC13639_02543 | Not Available | Positive | 2335053 - 2335934 | 31886.3 |
| major facilitator superfamily protein | NCTC13639_02544 | Not Available | Negative | 2335981 - 2337354 | 48206.6 |
| iclr-family transcriptional regulator | NCTC13639_02545 | Not Available | Positive | 2337529 - 2338320 | 30105.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

