Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yebe | NCTC13639_02524 | Not Available | Positive | 2318088 - 2318747 | 23738.3 |
| protease ii | NCTC13639_02525 | Not Available | Positive | 2318810 - 2320888 | 79631.4 |
| exodeoxyribonuclease x | NCTC13639_02526 | Not Available | Negative | 2320879 - 2321541 | 25086.4 |
| carbon-nitrogen hydrolase | NCTC13639_02527 | Not Available | Negative | 2321565 - 2322221 | 23823.5 |
| dna polymerase iii subunit theta | NCTC13639_02528 | Not Available | Negative | 2322328 - 2322558 | 8817.7 |
| copper resistance protein | NCTC13639_02529 | Not Available | Positive | 2322702 - 2323076 | 13003.5 |
| copper resistance protein | NCTC13639_02530 | Not Available | Positive | 2323080 - 2323952 | 32590.7 |
| protein of uncharacterised function (duf2511) | NCTC13639_02531 | Not Available | Positive | 2323973 - 2324311 | 12315.2 |
| serine/threonine protein phosphatase 1 | NCTC13639_02534 | Not Available | Positive | 2324724 - 2325365 | 24879.9 |
| protein of uncharacterised function (duf1482) | NCTC13639_02535 | Not Available | Negative | 2325366 - 2325557 | 7290.54 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

