Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | NCTC13639_02514 | Not Available | Positive | 2307841 - 2308812 | 37337.4 |
| pyruvate kinase | NCTC13639_02515 | Not Available | Negative | 2308856 - 2310298 | 51451.3 |
| hex-regulon repressor (rpir-family transcriptional regulator) | NCTC13639_02516 | Not Available | Negative | 2310417 - 2311310 | 33024.7 |
| uncharacterised protein | NCTC13639_02517 | Not Available | Positive | 2311398 - 2311643 | 9419.62 |
| glucose-6-phosphate 1-dehydrogenase | NCTC13639_02518 | Not Available | Positive | 2311654 - 2313129 | 55837.6 |
| phosphogluconate dehydratase | NCTC13639_02519 | Not Available | Positive | 2313363 - 2315174 | 64633.9 |
| keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase | NCTC13639_02520 | Not Available | Positive | 2315209 - 2315850 | 22232.2 |
| phosphoribosylglycinamide formyltransferase 2 | NCTC13639_02521 | Not Available | Negative | 2315918 - 2317096 | 42468.1 |
| dna damage-inducible protein yebg | NCTC13639_02522 | Not Available | Positive | 2317228 - 2317518 | 10651.4 |
| uncharacterised protein | NCTC13639_02523 | Not Available | Positive | 2317640 - 2317993 | 12925.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

