Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl-trna synthetase | NCTC13639_02504 | Not Available | Positive | 2298490 - 2300262 | 65683.9 |
| datp pyrophosphohydrolase | NCTC13639_02505 | Not Available | Positive | 2300264 - 2300707 | 17023.2 |
| probable transcriptional regulatory protein yebc | NCTC13639_02506 | Not Available | Positive | 2300736 - 2301479 | 26485.0 |
| crossover junction endodeoxyribonuclease | NCTC13639_02507 | Not Available | Positive | 2301514 - 2302035 | 18779.9 |
| holliday junction dna helicase ruva | NCTC13639_02508 | Not Available | Positive | 2302116 - 2302727 | 22147.1 |
| holliday junction dna helicase ruvb | NCTC13639_02509 | Not Available | Positive | 2302736 - 2303746 | 37211.1 |
| high-affinity zinc uptake system membrane protein | NCTC13639_02510 | Not Available | Negative | 2303825 - 2304562 | 26162.4 |
| zinc import atp-binding protein | NCTC13639_02511 | Not Available | Negative | 2304608 - 2305363 | 27776.2 |
| high-affinity zinc transporter periplasmic component | NCTC13639_02512 | Not Available | Positive | 2305427 - 2306386 | 34748.3 |
| peptidoglycan-binding peptidase | NCTC13639_02513 | Not Available | Positive | 2306402 - 2307721 | 48798.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

